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| <div class="subTitle">org.apache.commons.math3.genetics</div> |
| <h2 title="Class BinaryChromosome" class="title">Class BinaryChromosome</h2> |
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| <li> |
| <ul class="inheritance"> |
| <li><a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">org.apache.commons.math3.genetics.Chromosome</a></li> |
| <li> |
| <ul class="inheritance"> |
| <li><a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html" title="class in org.apache.commons.math3.genetics">org.apache.commons.math3.genetics.AbstractListChromosome</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>></li> |
| <li> |
| <ul class="inheritance"> |
| <li>org.apache.commons.math3.genetics.BinaryChromosome</li> |
| </ul> |
| </li> |
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| <div class="description"> |
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| <dt>All Implemented Interfaces:</dt> |
| <dd><a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Comparable.html?is-external=true" title="class or interface in java.lang">Comparable</a><<a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">Chromosome</a>>, <a href="../../../../../org/apache/commons/math3/genetics/Fitness.html" title="interface in org.apache.commons.math3.genetics">Fitness</a></dd> |
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| <br> |
| <pre>public abstract class <span class="strong">BinaryChromosome</span> |
| extends <a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html" title="class in org.apache.commons.math3.genetics">AbstractListChromosome</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>></pre> |
| <div class="block">Chromosome represented by a vector of 0s and 1s.</div> |
| <dl><dt><span class="strong">Since:</span></dt> |
| <dd>2.0</dd> |
| <dt><span class="strong">Version:</span></dt> |
| <dd>$Id: BinaryChromosome.java 1416643 2012-12-03 19:37:14Z tn $</dd></dl> |
| </li> |
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| <h3>Constructor Summary</h3> |
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| <caption><span>Constructors</span><span class="tabEnd"> </span></caption> |
| <tr> |
| <th class="colOne" scope="col">Constructor and Description</th> |
| </tr> |
| <tr class="altColor"> |
| <td class="colOne"><code><strong><a href="../../../../../org/apache/commons/math3/genetics/BinaryChromosome.html#BinaryChromosome(java.lang.Integer[])">BinaryChromosome</a></strong>(<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>[] representation)</code> |
| <div class="block">Constructor.</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colOne"><code><strong><a href="../../../../../org/apache/commons/math3/genetics/BinaryChromosome.html#BinaryChromosome(java.util.List)">BinaryChromosome</a></strong>(<a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>> representation)</code> |
| <div class="block">Constructor.</div> |
| </td> |
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| <th class="colFirst" scope="col">Modifier and Type</th> |
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| <tr class="altColor"> |
| <td class="colFirst"><code>protected void</code></td> |
| <td class="colLast"><code><strong><a href="../../../../../org/apache/commons/math3/genetics/BinaryChromosome.html#checkValidity(java.util.List)">checkValidity</a></strong>(<a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>> chromosomeRepresentation)</code> |
| <div class="block">Asserts that <code>representation</code> can represent a valid chromosome.</div> |
| </td> |
| </tr> |
| <tr class="rowColor"> |
| <td class="colFirst"><code>protected boolean</code></td> |
| <td class="colLast"><code><strong><a href="../../../../../org/apache/commons/math3/genetics/BinaryChromosome.html#isSame(org.apache.commons.math3.genetics.Chromosome)">isSame</a></strong>(<a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">Chromosome</a> another)</code> |
| <div class="block">Returns <code>true</code> iff <code>another</code> has the same representation and therefore the same fitness.</div> |
| </td> |
| </tr> |
| <tr class="altColor"> |
| <td class="colFirst"><code>static <a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>></code></td> |
| <td class="colLast"><code><strong><a href="../../../../../org/apache/commons/math3/genetics/BinaryChromosome.html#randomBinaryRepresentation(int)">randomBinaryRepresentation</a></strong>(int length)</code> |
| <div class="block">Returns a representation of a random binary array of length <code>length</code>.</div> |
| </td> |
| </tr> |
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| <li class="blockList"><a name="methods_inherited_from_class_org.apache.commons.math3.genetics.AbstractListChromosome"> |
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| </a> |
| <h3>Methods inherited from class org.apache.commons.math3.genetics.<a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html" title="class in org.apache.commons.math3.genetics">AbstractListChromosome</a></h3> |
| <code><a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html#getLength()">getLength</a>, <a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html#getRepresentation()">getRepresentation</a>, <a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html#newFixedLengthChromosome(java.util.List)">newFixedLengthChromosome</a>, <a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html#toString()">toString</a></code></li> |
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| <h3>Methods inherited from class org.apache.commons.math3.genetics.<a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">Chromosome</a></h3> |
| <code><a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#compareTo(org.apache.commons.math3.genetics.Chromosome)">compareTo</a>, <a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#findSameChromosome(org.apache.commons.math3.genetics.Population)">findSameChromosome</a>, <a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#getFitness()">getFitness</a>, <a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#searchForFitnessUpdate(org.apache.commons.math3.genetics.Population)">searchForFitnessUpdate</a></code></li> |
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| <h3>Methods inherited from class java.lang.<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</a></h3> |
| <code><a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#clone()" title="class or interface in java.lang">clone</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#equals(java.lang.Object)" title="class or interface in java.lang">equals</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#finalize()" title="class or interface in java.lang">finalize</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#getClass()" title="class or interface in java.lang">getClass</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#hashCode()" title="class or interface in java.lang">hashCode</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notify()" title="class or interface in java.lang">notify</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notifyAll()" title="class or interface in java.lang">notifyAll</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait()" title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long)" title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long, int)" title="class or interface in java.lang">wait</a></code></li> |
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| <h3>Methods inherited from interface org.apache.commons.math3.genetics.<a href="../../../../../org/apache/commons/math3/genetics/Fitness.html" title="interface in org.apache.commons.math3.genetics">Fitness</a></h3> |
| <code><a href="../../../../../org/apache/commons/math3/genetics/Fitness.html#fitness()">fitness</a></code></li> |
| </ul> |
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| <h4>BinaryChromosome</h4> |
| <pre>public BinaryChromosome(<a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>> representation) |
| throws <a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></pre> |
| <div class="block">Constructor.</div> |
| <dl><dt><span class="strong">Parameters:</span></dt><dd><code>representation</code> - list of {0,1} values representing the chromosome</dd> |
| <dt><span class="strong">Throws:</span></dt> |
| <dd><code><a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></code> - iff the <code>representation</code> can not represent a valid chromosome</dd></dl> |
| </li> |
| </ul> |
| <a name="BinaryChromosome(java.lang.Integer[])"> |
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| <h4>BinaryChromosome</h4> |
| <pre>public BinaryChromosome(<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>[] representation) |
| throws <a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></pre> |
| <div class="block">Constructor.</div> |
| <dl><dt><span class="strong">Parameters:</span></dt><dd><code>representation</code> - array of {0,1} values representing the chromosome</dd> |
| <dt><span class="strong">Throws:</span></dt> |
| <dd><code><a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></code> - iff the <code>representation</code> can not represent a valid chromosome</dd></dl> |
| </li> |
| </ul> |
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| <h3>Method Detail</h3> |
| <a name="checkValidity(java.util.List)"> |
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| </a> |
| <ul class="blockList"> |
| <li class="blockList"> |
| <h4>checkValidity</h4> |
| <pre>protected void checkValidity(<a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>> chromosomeRepresentation) |
| throws <a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></pre> |
| <div class="block">Asserts that <code>representation</code> can represent a valid chromosome.</div> |
| <dl> |
| <dt><strong>Specified by:</strong></dt> |
| <dd><code><a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html#checkValidity(java.util.List)">checkValidity</a></code> in class <code><a href="../../../../../org/apache/commons/math3/genetics/AbstractListChromosome.html" title="class in org.apache.commons.math3.genetics">AbstractListChromosome</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>></code></dd> |
| <dt><span class="strong">Parameters:</span></dt><dd><code>chromosomeRepresentation</code> - representation of the chromosome</dd> |
| <dt><span class="strong">Throws:</span></dt> |
| <dd><code><a href="../../../../../org/apache/commons/math3/genetics/InvalidRepresentationException.html" title="class in org.apache.commons.math3.genetics">InvalidRepresentationException</a></code> - iff the <code>representation</code> can not represent a valid chromosome</dd></dl> |
| </li> |
| </ul> |
| <a name="randomBinaryRepresentation(int)"> |
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| </a> |
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| <h4>randomBinaryRepresentation</h4> |
| <pre>public static <a href="http://docs.oracle.com/javase/6/docs/api/java/util/List.html?is-external=true" title="class or interface in java.util">List</a><<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Integer.html?is-external=true" title="class or interface in java.lang">Integer</a>> randomBinaryRepresentation(int length)</pre> |
| <div class="block">Returns a representation of a random binary array of length <code>length</code>.</div> |
| <dl><dt><span class="strong">Parameters:</span></dt><dd><code>length</code> - length of the array</dd> |
| <dt><span class="strong">Returns:</span></dt><dd>a random binary array of length <code>length</code></dd></dl> |
| </li> |
| </ul> |
| <a name="isSame(org.apache.commons.math3.genetics.Chromosome)"> |
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| </a> |
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| <h4>isSame</h4> |
| <pre>protected boolean isSame(<a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">Chromosome</a> another)</pre> |
| <div class="block"><strong>Description copied from class: <code><a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#isSame(org.apache.commons.math3.genetics.Chromosome)">Chromosome</a></code></strong></div> |
| <div class="block">Returns <code>true</code> iff <code>another</code> has the same representation and therefore the same fitness. By |
| default, it returns false -- override it in your implementation if you need it.</div> |
| <dl> |
| <dt><strong>Overrides:</strong></dt> |
| <dd><code><a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html#isSame(org.apache.commons.math3.genetics.Chromosome)">isSame</a></code> in class <code><a href="../../../../../org/apache/commons/math3/genetics/Chromosome.html" title="class in org.apache.commons.math3.genetics">Chromosome</a></code></dd> |
| <dt><span class="strong">Parameters:</span></dt><dd><code>another</code> - chromosome to compare</dd> |
| <dt><span class="strong">Returns:</span></dt><dd>true if <code>another</code> is equivalent to this chromosome</dd></dl> |
| </li> |
| </ul> |
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