blob: 5cd6e0bd15eb2cc19eb841363b7857c45a450354 [file] [log] [blame]
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN" "http://www.w3.org/TR/html4/loose.dtd">
<!-- NewPage -->
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html" charset="UTF-8">
<title>BinomialTest (Apache Commons Math 3.3 API)</title>
<link rel="stylesheet" type="text/css" href="../../../../../../stylesheet.css" title="Style">
</head>
<body>
<script type="text/javascript"><!--
if (location.href.indexOf('is-external=true') == -1) {
parent.document.title="BinomialTest (Apache Commons Math 3.3 API)";
}
//-->
</script>
<noscript>
<div>JavaScript is disabled on your browser.</div>
</noscript>
<!-- ========= START OF TOP NAVBAR ======= -->
<div class="topNav"><a name="navbar_top">
<!-- -->
</a><a href="#skip-navbar_top" title="Skip navigation links"></a><a name="navbar_top_firstrow">
<!-- -->
</a>
<ul class="navList" title="Navigation">
<li><a href="../../../../../../overview-summary.html">Overview</a></li>
<li><a href="package-summary.html">Package</a></li>
<li class="navBarCell1Rev">Class</li>
<li><a href="class-use/BinomialTest.html">Use</a></li>
<li><a href="package-tree.html">Tree</a></li>
<li><a href="../../../../../../deprecated-list.html">Deprecated</a></li>
<li><a href="../../../../../../index-all.html">Index</a></li>
<li><a href="../../../../../../help-doc.html">Help</a></li>
</ul>
<div class="aboutLanguage"><em><script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script></em></div>
</div>
<div class="subNav">
<ul class="navList">
<li><a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference"><span class="strong">Prev Class</span></a></li>
<li><a href="../../../../../../org/apache/commons/math3/stat/inference/ChiSquareTest.html" title="class in org.apache.commons.math3.stat.inference"><span class="strong">Next Class</span></a></li>
</ul>
<ul class="navList">
<li><a href="../../../../../../index.html?org/apache/commons/math3/stat/inference/BinomialTest.html" target="_top">Frames</a></li>
<li><a href="BinomialTest.html" target="_top">No Frames</a></li>
</ul>
<ul class="navList" id="allclasses_navbar_top">
<li><a href="../../../../../../allclasses-noframe.html">All Classes</a></li>
</ul>
<div>
<script type="text/javascript"><!--
allClassesLink = document.getElementById("allclasses_navbar_top");
if(window==top) {
allClassesLink.style.display = "block";
}
else {
allClassesLink.style.display = "none";
}
//-->
</script>
</div>
<div>
<ul class="subNavList">
<li>Summary:&nbsp;</li>
<li>Nested&nbsp;|&nbsp;</li>
<li>Field&nbsp;|&nbsp;</li>
<li><a href="#constructor_summary">Constr</a>&nbsp;|&nbsp;</li>
<li><a href="#method_summary">Method</a></li>
</ul>
<ul class="subNavList">
<li>Detail:&nbsp;</li>
<li>Field&nbsp;|&nbsp;</li>
<li><a href="#constructor_detail">Constr</a>&nbsp;|&nbsp;</li>
<li><a href="#method_detail">Method</a></li>
</ul>
</div>
<a name="skip-navbar_top">
<!-- -->
</a></div>
<!-- ========= END OF TOP NAVBAR ========= -->
<!-- ======== START OF CLASS DATA ======== -->
<div class="header">
<div class="subTitle">org.apache.commons.math3.stat.inference</div>
<h2 title="Class BinomialTest" class="title">Class BinomialTest</h2>
</div>
<div class="contentContainer">
<ul class="inheritance">
<li><a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">java.lang.Object</a></li>
<li>
<ul class="inheritance">
<li>org.apache.commons.math3.stat.inference.BinomialTest</li>
</ul>
</li>
</ul>
<div class="description">
<ul class="blockList">
<li class="blockList">
<hr>
<br>
<pre>public class <span class="strong">BinomialTest</span>
extends <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</a></pre>
<div class="block">Implements binomial test statistics.
<p>
Exact test for the statistical significance of deviations from a
theoretically expected distribution of observations into two categories.</div>
<dl><dt><span class="strong">Since:</span></dt>
<dd>3.3</dd>
<dt><span class="strong">Version:</span></dt>
<dd>$Id: BinomialTest.java 1532638 2013-10-16 04:29:31Z psteitz $</dd>
<dt><span class="strong">See Also:</span></dt><dd><a href="http://en.wikipedia.org/wiki/Binomial_test">Binomial test (Wikipedia)</a></dd></dl>
</li>
</ul>
</div>
<div class="summary">
<ul class="blockList">
<li class="blockList">
<!-- ======== CONSTRUCTOR SUMMARY ======== -->
<ul class="blockList">
<li class="blockList"><a name="constructor_summary">
<!-- -->
</a>
<h3>Constructor Summary</h3>
<table class="overviewSummary" border="0" cellpadding="3" cellspacing="0" summary="Constructor Summary table, listing constructors, and an explanation">
<caption><span>Constructors</span><span class="tabEnd">&nbsp;</span></caption>
<tr>
<th class="colOne" scope="col">Constructor and Description</th>
</tr>
<tr class="altColor">
<td class="colOne"><code><strong><a href="../../../../../../org/apache/commons/math3/stat/inference/BinomialTest.html#BinomialTest()">BinomialTest</a></strong>()</code>&nbsp;</td>
</tr>
</table>
</li>
</ul>
<!-- ========== METHOD SUMMARY =========== -->
<ul class="blockList">
<li class="blockList"><a name="method_summary">
<!-- -->
</a>
<h3>Method Summary</h3>
<table class="overviewSummary" border="0" cellpadding="3" cellspacing="0" summary="Method Summary table, listing methods, and an explanation">
<caption><span>Methods</span><span class="tabEnd">&nbsp;</span></caption>
<tr>
<th class="colFirst" scope="col">Modifier and Type</th>
<th class="colLast" scope="col">Method and Description</th>
</tr>
<tr class="altColor">
<td class="colFirst"><code>double</code></td>
<td class="colLast"><code><strong><a href="../../../../../../org/apache/commons/math3/stat/inference/BinomialTest.html#binomialTest(int, int, double, org.apache.commons.math3.stat.inference.AlternativeHypothesis)">binomialTest</a></strong>(int&nbsp;numberOfTrials,
int&nbsp;numberOfSuccesses,
double&nbsp;probability,
<a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference">AlternativeHypothesis</a>&nbsp;alternativeHypothesis)</code>
<div class="block">Returns the <i>observed significance level</i>, or
<a href="http://www.cas.lancs.ac.uk/glossary_v1.1/hyptest.html#pvalue">p-value</a>,
associated with a <a href="http://en.wikipedia.org/wiki/Binomial_test"> Binomial test</a>.</div>
</td>
</tr>
<tr class="rowColor">
<td class="colFirst"><code>boolean</code></td>
<td class="colLast"><code><strong><a href="../../../../../../org/apache/commons/math3/stat/inference/BinomialTest.html#binomialTest(int, int, double, org.apache.commons.math3.stat.inference.AlternativeHypothesis, double)">binomialTest</a></strong>(int&nbsp;numberOfTrials,
int&nbsp;numberOfSuccesses,
double&nbsp;probability,
<a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference">AlternativeHypothesis</a>&nbsp;alternativeHypothesis,
double&nbsp;alpha)</code>
<div class="block">Returns whether the null hypothesis can be rejected with the given confidence level.</div>
</td>
</tr>
</table>
<ul class="blockList">
<li class="blockList"><a name="methods_inherited_from_class_java.lang.Object">
<!-- -->
</a>
<h3>Methods inherited from class&nbsp;java.lang.<a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true" title="class or interface in java.lang">Object</a></h3>
<code><a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#clone()" title="class or interface in java.lang">clone</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#equals(java.lang.Object)" title="class or interface in java.lang">equals</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#finalize()" title="class or interface in java.lang">finalize</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#getClass()" title="class or interface in java.lang">getClass</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#hashCode()" title="class or interface in java.lang">hashCode</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notify()" title="class or interface in java.lang">notify</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#notifyAll()" title="class or interface in java.lang">notifyAll</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#toString()" title="class or interface in java.lang">toString</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait()" title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long)" title="class or interface in java.lang">wait</a>, <a href="http://docs.oracle.com/javase/6/docs/api/java/lang/Object.html?is-external=true#wait(long, int)" title="class or interface in java.lang">wait</a></code></li>
</ul>
</li>
</ul>
</li>
</ul>
</div>
<div class="details">
<ul class="blockList">
<li class="blockList">
<!-- ========= CONSTRUCTOR DETAIL ======== -->
<ul class="blockList">
<li class="blockList"><a name="constructor_detail">
<!-- -->
</a>
<h3>Constructor Detail</h3>
<a name="BinomialTest()">
<!-- -->
</a>
<ul class="blockListLast">
<li class="blockList">
<h4>BinomialTest</h4>
<pre>public&nbsp;BinomialTest()</pre>
</li>
</ul>
</li>
</ul>
<!-- ============ METHOD DETAIL ========== -->
<ul class="blockList">
<li class="blockList"><a name="method_detail">
<!-- -->
</a>
<h3>Method Detail</h3>
<a name="binomialTest(int, int, double, org.apache.commons.math3.stat.inference.AlternativeHypothesis, double)">
<!-- -->
</a>
<ul class="blockList">
<li class="blockList">
<h4>binomialTest</h4>
<pre>public&nbsp;boolean&nbsp;binomialTest(int&nbsp;numberOfTrials,
int&nbsp;numberOfSuccesses,
double&nbsp;probability,
<a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference">AlternativeHypothesis</a>&nbsp;alternativeHypothesis,
double&nbsp;alpha)</pre>
<div class="block">Returns whether the null hypothesis can be rejected with the given confidence level.
<p>
<strong>Preconditions</strong>:
<ul>
<li>Number of trials must be &ge; 0.</li>
<li>Number of successes must be &ge; 0.</li>
<li>Number of successes must be &le; number of trials.</li>
<li>Probability must be &ge; 0 and &le; 1.</li>
</ul></div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>numberOfTrials</code> - number of trials performed</dd><dd><code>numberOfSuccesses</code> - number of successes observed</dd><dd><code>probability</code> - assumed probability of a single trial under the null hypothesis</dd><dd><code>alternativeHypothesis</code> - type of hypothesis being evaluated (one- or two-sided)</dd><dd><code>alpha</code> - significance level of the test</dd>
<dt><span class="strong">Returns:</span></dt><dd>true if the null hypothesis can be rejected with confidence <code>1 - alpha</code></dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/NotPositiveException.html" title="class in org.apache.commons.math3.exception">NotPositiveException</a></code> - if <code>numberOfTrials</code> or <code>numberOfSuccesses</code> is negative</dd>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/OutOfRangeException.html" title="class in org.apache.commons.math3.exception">OutOfRangeException</a></code> - if <code>probability</code> is not between 0 and 1</dd>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/MathIllegalArgumentException.html" title="class in org.apache.commons.math3.exception">MathIllegalArgumentException</a></code> - if <code>numberOfTrials</code> &lt; <code>numberOfSuccesses</code> or
if <code>alternateHypothesis</code> is null.</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference"><code>AlternativeHypothesis</code></a></dd></dl>
</li>
</ul>
<a name="binomialTest(int, int, double, org.apache.commons.math3.stat.inference.AlternativeHypothesis)">
<!-- -->
</a>
<ul class="blockListLast">
<li class="blockList">
<h4>binomialTest</h4>
<pre>public&nbsp;double&nbsp;binomialTest(int&nbsp;numberOfTrials,
int&nbsp;numberOfSuccesses,
double&nbsp;probability,
<a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference">AlternativeHypothesis</a>&nbsp;alternativeHypothesis)</pre>
<div class="block">Returns the <i>observed significance level</i>, or
<a href="http://www.cas.lancs.ac.uk/glossary_v1.1/hyptest.html#pvalue">p-value</a>,
associated with a <a href="http://en.wikipedia.org/wiki/Binomial_test"> Binomial test</a>.
<p>
The number returned is the smallest significance level at which one can reject the null hypothesis.
The form of the hypothesis depends on <code>alternativeHypothesis</code>.</p>
<p>
The p-Value represents the likelihood of getting a result at least as extreme as the sample,
given the provided <code>probability</code> of success on a single trial. For single-sided tests,
this value can be directly derived from the Binomial distribution. For the two-sided test,
the implementation works as follows: we start by looking at the most extreme cases
(0 success and n success where n is the number of trials from the sample) and determine their likelihood.
The lower value is added to the p-Value (if both values are equal, both are added). Then we continue with
the next extreme value, until we added the value for the actual observed sample.</p>
<p>
<strong>Preconditions</strong>:
<ul>
<li>Number of trials must be &ge; 0.</li>
<li>Number of successes must be &ge; 0.</li>
<li>Number of successes must be &le; number of trials.</li>
<li>Probability must be &ge; 0 and &le; 1.</li>
</ul></p></div>
<dl><dt><span class="strong">Parameters:</span></dt><dd><code>numberOfTrials</code> - number of trials performed</dd><dd><code>numberOfSuccesses</code> - number of successes observed</dd><dd><code>probability</code> - assumed probability of a single trial under the null hypothesis</dd><dd><code>alternativeHypothesis</code> - type of hypothesis being evaluated (one- or two-sided)</dd>
<dt><span class="strong">Returns:</span></dt><dd>p-value</dd>
<dt><span class="strong">Throws:</span></dt>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/NotPositiveException.html" title="class in org.apache.commons.math3.exception">NotPositiveException</a></code> - if <code>numberOfTrials</code> or <code>numberOfSuccesses</code> is negative</dd>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/OutOfRangeException.html" title="class in org.apache.commons.math3.exception">OutOfRangeException</a></code> - if <code>probability</code> is not between 0 and 1</dd>
<dd><code><a href="../../../../../../org/apache/commons/math3/exception/MathIllegalArgumentException.html" title="class in org.apache.commons.math3.exception">MathIllegalArgumentException</a></code> - if <code>numberOfTrials</code> &lt; <code>numberOfSuccesses</code> or
if <code>alternateHypothesis</code> is null.</dd><dt><span class="strong">See Also:</span></dt><dd><a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference"><code>AlternativeHypothesis</code></a></dd></dl>
</li>
</ul>
</li>
</ul>
</li>
</ul>
</div>
</div>
<!-- ========= END OF CLASS DATA ========= -->
<!-- ======= START OF BOTTOM NAVBAR ====== -->
<div class="bottomNav"><a name="navbar_bottom">
<!-- -->
</a><a href="#skip-navbar_bottom" title="Skip navigation links"></a><a name="navbar_bottom_firstrow">
<!-- -->
</a>
<ul class="navList" title="Navigation">
<li><a href="../../../../../../overview-summary.html">Overview</a></li>
<li><a href="package-summary.html">Package</a></li>
<li class="navBarCell1Rev">Class</li>
<li><a href="class-use/BinomialTest.html">Use</a></li>
<li><a href="package-tree.html">Tree</a></li>
<li><a href="../../../../../../deprecated-list.html">Deprecated</a></li>
<li><a href="../../../../../../index-all.html">Index</a></li>
<li><a href="../../../../../../help-doc.html">Help</a></li>
</ul>
<div class="aboutLanguage"><em><script type="text/javascript" src="http://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script></em></div>
</div>
<div class="subNav">
<ul class="navList">
<li><a href="../../../../../../org/apache/commons/math3/stat/inference/AlternativeHypothesis.html" title="enum in org.apache.commons.math3.stat.inference"><span class="strong">Prev Class</span></a></li>
<li><a href="../../../../../../org/apache/commons/math3/stat/inference/ChiSquareTest.html" title="class in org.apache.commons.math3.stat.inference"><span class="strong">Next Class</span></a></li>
</ul>
<ul class="navList">
<li><a href="../../../../../../index.html?org/apache/commons/math3/stat/inference/BinomialTest.html" target="_top">Frames</a></li>
<li><a href="BinomialTest.html" target="_top">No Frames</a></li>
</ul>
<ul class="navList" id="allclasses_navbar_bottom">
<li><a href="../../../../../../allclasses-noframe.html">All Classes</a></li>
</ul>
<div>
<script type="text/javascript"><!--
allClassesLink = document.getElementById("allclasses_navbar_bottom");
if(window==top) {
allClassesLink.style.display = "block";
}
else {
allClassesLink.style.display = "none";
}
//-->
</script>
</div>
<div>
<ul class="subNavList">
<li>Summary:&nbsp;</li>
<li>Nested&nbsp;|&nbsp;</li>
<li>Field&nbsp;|&nbsp;</li>
<li><a href="#constructor_summary">Constr</a>&nbsp;|&nbsp;</li>
<li><a href="#method_summary">Method</a></li>
</ul>
<ul class="subNavList">
<li>Detail:&nbsp;</li>
<li>Field&nbsp;|&nbsp;</li>
<li><a href="#constructor_detail">Constr</a>&nbsp;|&nbsp;</li>
<li><a href="#method_detail">Method</a></li>
</ul>
</div>
<a name="skip-navbar_bottom">
<!-- -->
</a></div>
<!-- ======== END OF BOTTOM NAVBAR ======= -->
<p class="legalCopy"><small>Copyright &#169; 2003&#x2013;2014 <a href="http://www.apache.org/">The Apache Software Foundation</a>. All rights reserved.</small></p>
</body>
</html>